Virginia Tech VT Pseudomonas syringae Genome Sequencing Project Virginia Bioinformatics Institute


Please Note: The following paper describing the P. syringae pv. tomato T1 genome sequence has been published in the January 2009 issue of he journal Molecular Plant Microbe Interactions:

N.F.Almeida, S.Yan, M.Lindeberg, D.J.Studholme, D.J.Schneider, B.Condon, H.Liu, C.J.Viana, A.Warren, C.Evans, E.Kemen, D.MacLean, A.Angot, G.B.Martin, J.D.Jones, A.Collmer, J.C. Setubal and B.A.Vinatzer, A Draft Genome Sequence of Pseudomonas syringae pv. tomato T1 Reveals a Type III Effector Repertoire Significantly Divergent from that of P. syringae pv. tomato DC3000, Molecular Plant-Microbe Interactions, Jan 2009, Volume 22, Number 1: 52-62.

This Whole Genome Shotgun project has been deposited at DDBJ/EMBL/GenBank under the project accession ABSM00000000. The version described in this paper is the first version, ABSM01000000.

 Supplemental Material
  • Interactive version of Figure 3 (Venn Diagram)
  • Comparison of Pto T1 predicted proteins and all finished Pseudomonas
  • Close ups of the Pto DC3000 and Pto T1 genome alignments (several figures)

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Institute for Biomedical and Public Health Sciences
Virginia Tech
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Award # 0746501