Virginia Tech         Pseudomonas Syringae Assemblies Project Virginia Bioinformatics Institute

Choose genomes to see OrthoMCL families containing genes from them

The question this tool can answer is like that:

'I want to see all protein families that coitain at least one protein of genome A, at least one protein of genome B,
and NO proteins of genome C. The families may or not may contain genes of genome D or E (I dont care about D or E).'
In other words: 'I want to see all proteins present in genomes A and genome B that are not present in C, no matter if
they are present in genomes D or E.'
For this question, you should choose: include genome A; include genome B; exclude genome C; dont care about D;
and dont care about E.
  Include    Exclude  Don't care
Pal_BS91
Pal_T3C
Pan_126
Pma_ES4326
Pma_F1
Pma_M3
Pma_M6
Pto_JL1065
Pto_kuzzen40
Pto_Max13
Pto_NCPPB1108
Pto_T1
Pseudomonas aeruginosa LESB58
Pseudomonas aeruginosa PA7
Pseudomonas aeruginosa PAO1
Pseudomonas aeruginosa UCBPP-PA14
Pseudomonas entomophila L48
Pseudomonas fluorescens Pf-5
Pseudomonas fluorescens Pf0-1
Pseudomonas mendocina ymp
Pseudomonas putida F1
Pseudomonas putida GB-1
Pseudomonas putida KT2440
Pseudomonas putida W619
Pseudomonas stutzeri A1501
Pseudomonas syringae pv. phaseolicola 1448A
Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae tomato DC3000
Azotobacter vinelandii DJ
Hahella chejuensis KCTC 2396
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check all
(see all families)
Don't show me genes of "Don't Care" genomes